PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S19837.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 391aa    MW: 44730.6 Da    PI: 4.9718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S19837.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-194594255
            AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  Jcr4S19837.10 45 RYVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 94
                   79*******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.55E-3244101No hitNo description
SMARTSM003803.8E-3545108IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-1945101IPR016177DNA-binding domain
PROSITE profilePS5103219.95445102IPR001471AP2/ERF domain
PfamPF008471.7E-144594IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-2745101IPR001471AP2/ERF domain
PRINTSPR003673.7E-84657IPR001471AP2/ERF domain
PRINTSPR003673.7E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MSLMRKRKAK STSHEEEPIN YESISWDKVL EEAVTLTGEL RPRKRYVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTYDTAEE AARAYDEAAC LLRGANTRTN FFPFSNSLKP ALPSKISNLL  120
LQRLKARNNQ DSRKAKEIHF DNFLNCTATS SLSTTSDHFD TNSDDKYFLE HPKFLKGKEL  180
SEVDHTPTSC FTRQTLDCWA DGPLGNLNES LNSNFNLENE EEKNQEVEKE KEEKIDMLKI  240
DFSIHEDASI STYYSPFDIA EEMMAPIVEE DKNYNYNNGD NEQSLMVKEI MNRLNYERRF  300
SASLYAYNGV HERLKLGYEG MEKSSNGSRS IKIESCDDKM SESNNSLRLI DINDNGEIIK  360
KKKEEEKVQD QEIAGSSSSS SSSYSKEGGG D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012068341.10.0PREDICTED: uncharacterized protein LOC105630951
STRINGPOPTR_0008s09080.16e-74(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-19related to AP2 11